A function setting data format for DEG barplot visualization

Source: R/set_degbar_data.R

This function summarize the variable deg from the deg_def() function to visualize as barplots the number of DEGs per input study

set_degbar_data(diffexp)

Arguments

diffexp

list of data.frame/data.table (s) output of the deg_def() function <list>

Value

data.frame DEG by input

Examples

data(diffexplist)
diffexp <- lapply(diffexplist, function(...) deg_def(..., "pvalue", 
           "Log2FC", 0.05, 0))
bardat <- set_degbar_data(diffexp)
head(bardat, 3)
#>    dataset      Regulation
#> 1 GSE12050 c.Downregulated
#> 2 GSE12050 c.Downregulated
#> 3 GSE12050   b.Unperturbed